R-universe - julienrocheigepp (JulienRocheIGEPP)

APIS - Auto-Adaptive Parentage Inference Software Tolerant to Missing Parents

Parentage assignment package. Parentage assignment is performed based on observed average Mendelian transmission probability distributions or Exclusion. The main functions of this package are the function APIS_2n(), APIS_3n() and launch_APIShiny(), which perform parentage assignment.

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2.30 score 2 scripts 638 downloads

GenoTriplo - Genotyping Triploids (or Diploids) from Luminescence Data

Genotyping of triploid individuals from luminescence data (marker probeset A and B). Works also for diploids. Two main functions: Run_Clustering() that regroups individuals with a same genotype based on proximity and Run_Genotyping() that assigns a genotype to each cluster. For Shiny interface use: launch_GenoShiny().

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1.00 score 258 downloads